Line | Branch | Exec | Source |
---|---|---|---|
1 | /* | ||
2 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
3 | SLEPc - Scalable Library for Eigenvalue Problem Computations | ||
4 | Copyright (c) 2002-, Universitat Politecnica de Valencia, Spain | ||
5 | |||
6 | This file is part of SLEPc. | ||
7 | SLEPc is distributed under a 2-clause BSD license (see LICENSE). | ||
8 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
9 | */ | ||
10 | |||
11 | static char help[] = "Test the SLP solver with a user-provided EPS.\n\n" | ||
12 | "This is a simplified version of ex20.\n" | ||
13 | "The command line options are:\n" | ||
14 | " -n <n>, where <n> = number of grid subdivisions.\n"; | ||
15 | |||
16 | /* | ||
17 | Solve 1-D PDE | ||
18 | -u'' = lambda*u | ||
19 | on [0,1] subject to | ||
20 | u(0)=0, u'(1)=u(1)*lambda*kappa/(kappa-lambda) | ||
21 | */ | ||
22 | |||
23 | #include <slepcnep.h> | ||
24 | |||
25 | /* | ||
26 | User-defined routines | ||
27 | */ | ||
28 | PetscErrorCode FormFunction(NEP,PetscScalar,Mat,Mat,void*); | ||
29 | PetscErrorCode FormJacobian(NEP,PetscScalar,Mat,void*); | ||
30 | |||
31 | /* | ||
32 | User-defined application context | ||
33 | */ | ||
34 | typedef struct { | ||
35 | PetscScalar kappa; /* ratio between stiffness of spring and attached mass */ | ||
36 | PetscReal h; /* mesh spacing */ | ||
37 | } ApplicationCtx; | ||
38 | |||
39 | 20 | int main(int argc,char **argv) | |
40 | { | ||
41 | 20 | NEP nep; | |
42 | 20 | EPS eps; | |
43 | 20 | KSP ksp; | |
44 | 20 | PC pc; | |
45 | 20 | Mat F,J; | |
46 | 20 | ApplicationCtx ctx; | |
47 | 20 | PetscInt n=128; | |
48 | 20 | PetscReal deftol; | |
49 | 20 | PetscBool terse,flag,ts; | |
50 | |||
51 |
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20 | PetscFunctionBeginUser; |
52 |
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20 | PetscCall(SlepcInitialize(&argc,&argv,NULL,help)); |
53 |
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20 | PetscCall(PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL)); |
54 |
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20 | PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\n1-D Nonlinear Eigenproblem, n=%" PetscInt_FMT "\n\n",n)); |
55 | 20 | ctx.h = 1.0/(PetscReal)n; | |
56 | 20 | ctx.kappa = 1.0; | |
57 | |||
58 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
59 | Create a standalone EPS with appropriate settings | ||
60 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
61 | |||
62 |
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20 | PetscCall(EPSCreate(PETSC_COMM_WORLD,&eps)); |
63 |
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20 | PetscCall(EPSSetType(eps,EPSGD)); |
64 |
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20 | PetscCall(EPSSetFromOptions(eps)); |
65 | |||
66 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
67 | Create a standalone KSP with appropriate settings | ||
68 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
69 | |||
70 |
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20 | PetscCall(KSPCreate(PETSC_COMM_WORLD,&ksp)); |
71 |
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20 | PetscCall(KSPSetType(ksp,KSPBCGS)); |
72 |
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20 | PetscCall(KSPGetPC(ksp,&pc)); |
73 |
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20 | PetscCall(PCSetType(pc,PCBJACOBI)); |
74 |
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20 | PetscCall(KSPSetFromOptions(ksp)); |
75 | |||
76 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
77 | Prepare nonlinear eigensolver context | ||
78 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
79 | |||
80 |
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20 | PetscCall(NEPCreate(PETSC_COMM_WORLD,&nep)); |
81 | |||
82 | /* Create Function and Jacobian matrices; set evaluation routines */ | ||
83 |
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20 | PetscCall(MatCreate(PETSC_COMM_WORLD,&F)); |
84 |
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20 | PetscCall(MatSetSizes(F,PETSC_DECIDE,PETSC_DECIDE,n,n)); |
85 |
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20 | PetscCall(MatSetFromOptions(F)); |
86 |
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20 | PetscCall(MatSeqAIJSetPreallocation(F,3,NULL)); |
87 |
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20 | PetscCall(MatMPIAIJSetPreallocation(F,3,NULL,1,NULL)); |
88 |
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20 | PetscCall(NEPSetFunction(nep,F,F,FormFunction,&ctx)); |
89 | |||
90 |
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20 | PetscCall(MatCreate(PETSC_COMM_WORLD,&J)); |
91 |
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20 | PetscCall(MatSetSizes(J,PETSC_DECIDE,PETSC_DECIDE,n,n)); |
92 |
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20 | PetscCall(MatSetFromOptions(J)); |
93 |
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20 | PetscCall(MatSeqAIJSetPreallocation(J,3,NULL)); |
94 |
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20 | PetscCall(MatMPIAIJSetPreallocation(F,3,NULL,1,NULL)); |
95 |
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20 | PetscCall(NEPSetJacobian(nep,J,FormJacobian,&ctx)); |
96 | |||
97 | /* Set options */ | ||
98 |
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20 | PetscCall(NEPSetType(nep,NEPSLP)); |
99 |
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20 | PetscCall(NEPSLPSetEPS(nep,eps)); |
100 |
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20 | PetscCall(NEPSLPSetKSP(nep,ksp)); |
101 |
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20 | PetscCall(NEPSetFromOptions(nep)); |
102 | |||
103 | /* Print some options */ | ||
104 |
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20 | PetscCall(PetscObjectTypeCompare((PetscObject)nep,NEPSLP,&flag)); |
105 |
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20 | if (flag) { |
106 |
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20 | PetscCall(NEPGetTwoSided(nep,&ts)); |
107 |
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20 | if (ts) { |
108 |
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10 | PetscCall(NEPSLPGetDeflationThreshold(nep,&deftol)); |
109 |
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10 | PetscCall(PetscPrintf(PETSC_COMM_WORLD," Two-sided solve with deflation threshold=%g\n",(double)deftol)); |
110 | } | ||
111 | } | ||
112 | |||
113 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
114 | Solve the eigensystem | ||
115 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
116 | |||
117 |
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20 | PetscCall(NEPSolve(nep)); |
118 | |||
119 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
120 | Display solution and clean up | ||
121 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
122 | |||
123 | /* show detailed info unless -terse option is given by user */ | ||
124 |
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20 | PetscCall(PetscOptionsHasName(NULL,NULL,"-terse",&terse)); |
125 |
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20 | if (terse) PetscCall(NEPErrorView(nep,NEP_ERROR_RELATIVE,NULL)); |
126 | else { | ||
127 | ✗ | PetscCall(PetscViewerPushFormat(PETSC_VIEWER_STDOUT_WORLD,PETSC_VIEWER_ASCII_INFO_DETAIL)); | |
128 | ✗ | PetscCall(NEPConvergedReasonView(nep,PETSC_VIEWER_STDOUT_WORLD)); | |
129 | ✗ | PetscCall(NEPErrorView(nep,NEP_ERROR_RELATIVE,PETSC_VIEWER_STDOUT_WORLD)); | |
130 | ✗ | PetscCall(PetscViewerPopFormat(PETSC_VIEWER_STDOUT_WORLD)); | |
131 | } | ||
132 | |||
133 |
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20 | PetscCall(NEPDestroy(&nep)); |
134 |
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20 | PetscCall(EPSDestroy(&eps)); |
135 |
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20 | PetscCall(KSPDestroy(&ksp)); |
136 |
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20 | PetscCall(MatDestroy(&F)); |
137 |
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20 | PetscCall(MatDestroy(&J)); |
138 |
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20 | PetscCall(SlepcFinalize()); |
139 | return 0; | ||
140 | } | ||
141 | |||
142 | /* ------------------------------------------------------------------- */ | ||
143 | /* | ||
144 | FormFunction - Computes Function matrix T(lambda) | ||
145 | |||
146 | Input Parameters: | ||
147 | . nep - the NEP context | ||
148 | . lambda - the scalar argument | ||
149 | . ctx - optional user-defined context, as set by NEPSetFunction() | ||
150 | |||
151 | Output Parameters: | ||
152 | . fun - Function matrix | ||
153 | . B - optionally different preconditioning matrix | ||
154 | */ | ||
155 | 110 | PetscErrorCode FormFunction(NEP nep,PetscScalar lambda,Mat fun,Mat B,void *ctx) | |
156 | { | ||
157 | 110 | ApplicationCtx *user = (ApplicationCtx*)ctx; | |
158 | 110 | PetscScalar A[3],c,d; | |
159 | 110 | PetscReal h; | |
160 | 110 | PetscInt i,n,j[3],Istart,Iend; | |
161 | 110 | PetscBool FirstBlock=PETSC_FALSE,LastBlock=PETSC_FALSE; | |
162 | |||
163 |
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110 | PetscFunctionBeginUser; |
164 | /* | ||
165 | Compute Function entries and insert into matrix | ||
166 | */ | ||
167 |
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110 | PetscCall(MatGetSize(fun,&n,NULL)); |
168 |
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110 | PetscCall(MatGetOwnershipRange(fun,&Istart,&Iend)); |
169 |
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110 | if (Istart==0) FirstBlock=PETSC_TRUE; |
170 |
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110 | if (Iend==n) LastBlock=PETSC_TRUE; |
171 | 110 | h = user->h; | |
172 | 110 | c = user->kappa/(lambda-user->kappa); | |
173 | 110 | d = n; | |
174 | |||
175 | /* | ||
176 | Interior grid points | ||
177 | */ | ||
178 |
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13970 | for (i=(FirstBlock? Istart+1: Istart);i<(LastBlock? Iend-1: Iend);i++) { |
179 | 13860 | j[0] = i-1; j[1] = i; j[2] = i+1; | |
180 | 13860 | A[0] = A[2] = -d-lambda*h/6.0; A[1] = 2.0*(d-lambda*h/3.0); | |
181 |
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13860 | PetscCall(MatSetValues(fun,1,&i,3,j,A,INSERT_VALUES)); |
182 | } | ||
183 | |||
184 | /* | ||
185 | Boundary points | ||
186 | */ | ||
187 |
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110 | if (FirstBlock) { |
188 | 110 | i = 0; | |
189 | 110 | j[0] = 0; j[1] = 1; | |
190 | 110 | A[0] = 2.0*(d-lambda*h/3.0); A[1] = -d-lambda*h/6.0; | |
191 |
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110 | PetscCall(MatSetValues(fun,1,&i,2,j,A,INSERT_VALUES)); |
192 | } | ||
193 | |||
194 |
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110 | if (LastBlock) { |
195 | 110 | i = n-1; | |
196 | 110 | j[0] = n-2; j[1] = n-1; | |
197 | 110 | A[0] = -d-lambda*h/6.0; A[1] = d-lambda*h/3.0+lambda*c; | |
198 |
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110 | PetscCall(MatSetValues(fun,1,&i,2,j,A,INSERT_VALUES)); |
199 | } | ||
200 | |||
201 | /* | ||
202 | Assemble matrix | ||
203 | */ | ||
204 |
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110 | PetscCall(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY)); |
205 |
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110 | PetscCall(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY)); |
206 |
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110 | if (fun != B) { |
207 | ✗ | PetscCall(MatAssemblyBegin(fun,MAT_FINAL_ASSEMBLY)); | |
208 | ✗ | PetscCall(MatAssemblyEnd(fun,MAT_FINAL_ASSEMBLY)); | |
209 | } | ||
210 |
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22 | PetscFunctionReturn(PETSC_SUCCESS); |
211 | } | ||
212 | |||
213 | /* ------------------------------------------------------------------- */ | ||
214 | /* | ||
215 | FormJacobian - Computes Jacobian matrix T'(lambda) | ||
216 | |||
217 | Input Parameters: | ||
218 | . nep - the NEP context | ||
219 | . lambda - the scalar argument | ||
220 | . ctx - optional user-defined context, as set by NEPSetJacobian() | ||
221 | |||
222 | Output Parameters: | ||
223 | . jac - Jacobian matrix | ||
224 | . B - optionally different preconditioning matrix | ||
225 | */ | ||
226 | 40 | PetscErrorCode FormJacobian(NEP nep,PetscScalar lambda,Mat jac,void *ctx) | |
227 | { | ||
228 | 40 | ApplicationCtx *user = (ApplicationCtx*)ctx; | |
229 | 40 | PetscScalar A[3],c; | |
230 | 40 | PetscReal h; | |
231 | 40 | PetscInt i,n,j[3],Istart,Iend; | |
232 | 40 | PetscBool FirstBlock=PETSC_FALSE,LastBlock=PETSC_FALSE; | |
233 | |||
234 |
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40 | PetscFunctionBeginUser; |
235 | /* | ||
236 | Compute Jacobian entries and insert into matrix | ||
237 | */ | ||
238 |
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40 | PetscCall(MatGetSize(jac,&n,NULL)); |
239 |
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40 | PetscCall(MatGetOwnershipRange(jac,&Istart,&Iend)); |
240 |
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40 | if (Istart==0) FirstBlock=PETSC_TRUE; |
241 |
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40 | if (Iend==n) LastBlock=PETSC_TRUE; |
242 | 40 | h = user->h; | |
243 | 40 | c = user->kappa/(lambda-user->kappa); | |
244 | |||
245 | /* | ||
246 | Interior grid points | ||
247 | */ | ||
248 |
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5080 | for (i=(FirstBlock? Istart+1: Istart);i<(LastBlock? Iend-1: Iend);i++) { |
249 | 5040 | j[0] = i-1; j[1] = i; j[2] = i+1; | |
250 | 5040 | A[0] = A[2] = -h/6.0; A[1] = -2.0*h/3.0; | |
251 |
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5040 | PetscCall(MatSetValues(jac,1,&i,3,j,A,INSERT_VALUES)); |
252 | } | ||
253 | |||
254 | /* | ||
255 | Boundary points | ||
256 | */ | ||
257 |
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40 | if (FirstBlock) { |
258 | 40 | i = 0; | |
259 | 40 | j[0] = 0; j[1] = 1; | |
260 | 40 | A[0] = -2.0*h/3.0; A[1] = -h/6.0; | |
261 |
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40 | PetscCall(MatSetValues(jac,1,&i,2,j,A,INSERT_VALUES)); |
262 | } | ||
263 | |||
264 |
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40 | if (LastBlock) { |
265 | 40 | i = n-1; | |
266 | 40 | j[0] = n-2; j[1] = n-1; | |
267 | 40 | A[0] = -h/6.0; A[1] = -h/3.0-c*c; | |
268 |
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40 | PetscCall(MatSetValues(jac,1,&i,2,j,A,INSERT_VALUES)); |
269 | } | ||
270 | |||
271 | /* | ||
272 | Assemble matrix | ||
273 | */ | ||
274 |
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40 | PetscCall(MatAssemblyBegin(jac,MAT_FINAL_ASSEMBLY)); |
275 |
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40 | PetscCall(MatAssemblyEnd(jac,MAT_FINAL_ASSEMBLY)); |
276 |
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8 | PetscFunctionReturn(PETSC_SUCCESS); |
277 | } | ||
278 | |||
279 | /*TEST | ||
280 | |||
281 | test: | ||
282 | args: -nep_target 21 -terse | ||
283 | requires: !single | ||
284 | test: | ||
285 | suffix: 1 | ||
286 | test: | ||
287 | suffix: 1_ts | ||
288 | args: -nep_two_sided | ||
289 | |||
290 | TEST*/ | ||
291 |