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1 | /* | ||
2 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
3 | SLEPc - Scalable Library for Eigenvalue Problem Computations | ||
4 | Copyright (c) 2002-, Universitat Politecnica de Valencia, Spain | ||
5 | |||
6 | This file is part of SLEPc. | ||
7 | SLEPc is distributed under a 2-clause BSD license (see LICENSE). | ||
8 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
9 | */ | ||
10 | |||
11 | static char help[] = "Computes the smallest nonzero eigenvalue of the Laplacian of a graph.\n\n" | ||
12 | "This example illustrates EPSSetDeflationSpace(). The example graph corresponds to a " | ||
13 | "2-D regular mesh. The command line options are:\n" | ||
14 | " -n <n>, where <n> = number of grid subdivisions in x dimension.\n" | ||
15 | " -m <m>, where <m> = number of grid subdivisions in y dimension.\n\n"; | ||
16 | |||
17 | #include <slepceps.h> | ||
18 | |||
19 | 80 | int main (int argc,char **argv) | |
20 | { | ||
21 | 80 | EPS eps; /* eigenproblem solver context */ | |
22 | 80 | Mat A; /* operator matrix */ | |
23 | 80 | Vec x; | |
24 | 80 | PetscInt N,n=10,m,i,j,II,Istart,Iend,nev; | |
25 | 80 | PetscScalar w; | |
26 | 80 | PetscBool flag; | |
27 | |||
28 |
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80 | PetscFunctionBeginUser; |
29 |
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80 | PetscCall(SlepcInitialize(&argc,&argv,NULL,help)); |
30 | |||
31 |
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80 | PetscCall(PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL)); |
32 |
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80 | PetscCall(PetscOptionsGetInt(NULL,NULL,"-m",&m,&flag)); |
33 |
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80 | if (!flag) m=n; |
34 | 80 | N = n*m; | |
35 |
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80 | PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nFiedler vector of a 2-D regular mesh, N=%" PetscInt_FMT " (%" PetscInt_FMT "x%" PetscInt_FMT " grid)\n\n",N,n,m)); |
36 | |||
37 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
38 | Compute the operator matrix that defines the eigensystem, Ax=kx | ||
39 | In this example, A = L(G), where L is the Laplacian of graph G, i.e. | ||
40 | Lii = degree of node i, Lij = -1 if edge (i,j) exists in G | ||
41 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
42 | |||
43 |
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80 | PetscCall(MatCreate(PETSC_COMM_WORLD,&A)); |
44 |
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80 | PetscCall(MatSetSizes(A,PETSC_DECIDE,PETSC_DECIDE,N,N)); |
45 |
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80 | PetscCall(MatSetFromOptions(A)); |
46 | |||
47 |
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80 | PetscCall(MatGetOwnershipRange(A,&Istart,&Iend)); |
48 |
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8880 | for (II=Istart;II<Iend;II++) { |
49 | 8800 | i = II/n; j = II-i*n; | |
50 | 8800 | w = 0.0; | |
51 |
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8800 | if (i>0) { PetscCall(MatSetValue(A,II,II-n,-1.0,INSERT_VALUES)); w=w+1.0; } |
52 |
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8800 | if (i<m-1) { PetscCall(MatSetValue(A,II,II+n,-1.0,INSERT_VALUES)); w=w+1.0; } |
53 |
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8800 | if (j>0) { PetscCall(MatSetValue(A,II,II-1,-1.0,INSERT_VALUES)); w=w+1.0; } |
54 |
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8800 | if (j<n-1) { PetscCall(MatSetValue(A,II,II+1,-1.0,INSERT_VALUES)); w=w+1.0; } |
55 |
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8800 | PetscCall(MatSetValue(A,II,II,w,INSERT_VALUES)); |
56 | } | ||
57 | |||
58 |
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80 | PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY)); |
59 |
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80 | PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY)); |
60 | |||
61 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
62 | Create the eigensolver and set various options | ||
63 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
64 | |||
65 | /* | ||
66 | Create eigensolver context | ||
67 | */ | ||
68 |
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80 | PetscCall(EPSCreate(PETSC_COMM_WORLD,&eps)); |
69 | |||
70 | /* | ||
71 | Set operators. In this case, it is a standard eigenvalue problem | ||
72 | */ | ||
73 |
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80 | PetscCall(EPSSetOperators(eps,A,NULL)); |
74 |
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80 | PetscCall(EPSSetProblemType(eps,EPS_HEP)); |
75 | |||
76 | /* | ||
77 | Select portion of spectrum | ||
78 | */ | ||
79 |
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80 | PetscCall(EPSSetWhichEigenpairs(eps,EPS_SMALLEST_REAL)); |
80 | |||
81 | /* | ||
82 | Set solver parameters at runtime | ||
83 | */ | ||
84 |
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80 | PetscCall(EPSSetFromOptions(eps)); |
85 | |||
86 | /* | ||
87 | Attach deflation space: in this case, the matrix has a constant | ||
88 | nullspace, [1 1 ... 1]^T is the eigenvector of the zero eigenvalue | ||
89 | */ | ||
90 |
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80 | PetscCall(MatCreateVecs(A,&x,NULL)); |
91 |
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80 | PetscCall(VecSet(x,1.0)); |
92 |
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80 | PetscCall(EPSSetDeflationSpace(eps,1,&x)); |
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80 | PetscCall(VecDestroy(&x)); |
94 | |||
95 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
96 | Solve the eigensystem | ||
97 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
98 | |||
99 |
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80 | PetscCall(EPSSolve(eps)); |
100 |
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80 | PetscCall(EPSGetDimensions(eps,&nev,NULL,NULL)); |
101 |
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80 | PetscCall(PetscPrintf(PETSC_COMM_WORLD," Number of requested eigenvalues: %" PetscInt_FMT "\n",nev)); |
102 | |||
103 | /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
104 | Display solution and clean up | ||
105 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */ | ||
106 | |||
107 |
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80 | PetscCall(EPSErrorView(eps,EPS_ERROR_RELATIVE,NULL)); |
108 |
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80 | PetscCall(EPSDestroy(&eps)); |
109 |
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80 | PetscCall(MatDestroy(&A)); |
110 |
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80 | PetscCall(SlepcFinalize()); |
111 | return 0; | ||
112 | } | ||
113 | |||
114 | /*TEST | ||
115 | |||
116 | testset: | ||
117 | args: -eps_nev 4 -m 11 -eps_max_it 500 | ||
118 | output_file: output/test10_1.out | ||
119 | test: | ||
120 | suffix: 1 | ||
121 | args: -eps_type {{krylovschur arnoldi gd jd rqcg}} | ||
122 | test: | ||
123 | suffix: 1_lobpcg | ||
124 | args: -eps_type lobpcg -eps_lobpcg_blocksize 6 | ||
125 | test: | ||
126 | suffix: 1_lanczos | ||
127 | args: -eps_type lanczos -eps_lanczos_reorthog local | ||
128 | requires: !single | ||
129 | test: | ||
130 | suffix: 1_gd2 | ||
131 | args: -eps_type gd -eps_gd_double_expansion | ||
132 | |||
133 | TEST*/ | ||
134 |