| Line | Branch | Exec | Source |
|---|---|---|---|
| 1 | /* | ||
| 2 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
| 3 | SLEPc - Scalable Library for Eigenvalue Problem Computations | ||
| 4 | Copyright (c) 2002-, Universitat Politecnica de Valencia, Spain | ||
| 5 | |||
| 6 | This file is part of SLEPc. | ||
| 7 | SLEPc is distributed under a 2-clause BSD license (see LICENSE). | ||
| 8 | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | ||
| 9 | */ | ||
| 10 | /* | ||
| 11 | SLEPc polynomial eigensolver: "toar" | ||
| 12 | |||
| 13 | Method: TOAR | ||
| 14 | |||
| 15 | Algorithm: | ||
| 16 | |||
| 17 | Two-Level Orthogonal Arnoldi. | ||
| 18 | |||
| 19 | References: | ||
| 20 | |||
| 21 | [1] Y. Su, J. Zhang and Z. Bai, "A compact Arnoldi algorithm for | ||
| 22 | polynomial eigenvalue problems", talk presented at RANMEP 2008. | ||
| 23 | |||
| 24 | [2] C. Campos and J.E. Roman, "Parallel Krylov solvers for the | ||
| 25 | polynomial eigenvalue problem in SLEPc", SIAM J. Sci. Comput. | ||
| 26 | 38(5):S385-S411, 2016. | ||
| 27 | |||
| 28 | [3] D. Lu, Y. Su and Z. Bai, "Stability analysis of the two-level | ||
| 29 | orthogonal Arnoldi procedure", SIAM J. Matrix Anal. App. | ||
| 30 | 37(1):195-214, 2016. | ||
| 31 | */ | ||
| 32 | |||
| 33 | #include <slepc/private/pepimpl.h> /*I "slepcpep.h" I*/ | ||
| 34 | #include "../src/pep/impls/krylov/pepkrylov.h" | ||
| 35 | #include <slepcblaslapack.h> | ||
| 36 | |||
| 37 | static PetscBool cited = PETSC_FALSE; | ||
| 38 | static const char citation[] = | ||
| 39 | "@Article{slepc-pep,\n" | ||
| 40 | " author = \"C. Campos and J. E. Roman\",\n" | ||
| 41 | " title = \"Parallel {Krylov} solvers for the polynomial eigenvalue problem in {SLEPc}\",\n" | ||
| 42 | " journal = \"{SIAM} J. Sci. Comput.\",\n" | ||
| 43 | " volume = \"38\",\n" | ||
| 44 | " number = \"5\",\n" | ||
| 45 | " pages = \"S385--S411\",\n" | ||
| 46 | " year = \"2016,\"\n" | ||
| 47 | " doi = \"https://doi.org/10.1137/15M1022458\"\n" | ||
| 48 | "}\n"; | ||
| 49 | |||
| 50 | 990 | static PetscErrorCode PEPSetUp_TOAR(PEP pep) | |
| 51 | { | ||
| 52 | 990 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 53 | 990 | PetscBool sinv,flg; | |
| 54 | 990 | PetscInt i; | |
| 55 | |||
| 56 |
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990 | PetscFunctionBegin; |
| 57 |
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990 | PEPCheckShiftSinvert(pep); |
| 58 |
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990 | PetscCall(PEPSetDimensions_Default(pep,pep->nev,&pep->ncv,&pep->mpd)); |
| 59 |
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990 | PetscCheck(ctx->lock || pep->mpd>=pep->ncv,PetscObjectComm((PetscObject)pep),PETSC_ERR_SUP,"Should not use mpd parameter in non-locking variant"); |
| 60 |
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990 | if (pep->max_it==PETSC_DETERMINE) pep->max_it = PetscMax(100,2*(pep->nmat-1)*pep->n/pep->ncv); |
| 61 |
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990 | if (!pep->which) PetscCall(PEPSetWhichEigenpairs_Default(pep)); |
| 62 |
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990 | PetscCheck(pep->which!=PEP_ALL,PetscObjectComm((PetscObject)pep),PETSC_ERR_SUP,"This solver does not support computing all eigenvalues"); |
| 63 |
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990 | if (pep->problem_type!=PEP_GENERAL) PetscCall(PetscInfo(pep,"Problem type ignored, performing a non-symmetric linearization\n")); |
| 64 | |||
| 65 |
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990 | if (!ctx->keep) ctx->keep = 0.5; |
| 66 | |||
| 67 |
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990 | PetscCall(PEPAllocateSolution(pep,pep->nmat-1)); |
| 68 |
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990 | PetscCall(PEPSetWorkVecs(pep,3)); |
| 69 |
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990 | PetscCall(DSSetType(pep->ds,DSNHEP)); |
| 70 |
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990 | PetscCall(DSSetExtraRow(pep->ds,PETSC_TRUE)); |
| 71 |
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990 | PetscCall(DSAllocate(pep->ds,pep->ncv+1)); |
| 72 | |||
| 73 |
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990 | PetscCall(PEPBasisCoefficients(pep,pep->pbc)); |
| 74 |
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990 | PetscCall(STGetTransform(pep->st,&flg)); |
| 75 |
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990 | if (!flg) { |
| 76 |
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880 | PetscCall(PetscFree(pep->solvematcoeffs)); |
| 77 |
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880 | PetscCall(PetscMalloc1(pep->nmat,&pep->solvematcoeffs)); |
| 78 |
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880 | PetscCall(PetscObjectTypeCompare((PetscObject)pep->st,STSINVERT,&sinv)); |
| 79 |
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880 | if (sinv) PetscCall(PEPEvaluateBasis(pep,pep->target,0,pep->solvematcoeffs,NULL)); |
| 80 | else { | ||
| 81 |
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997 | for (i=0;i<pep->nmat-1;i++) pep->solvematcoeffs[i] = 0.0; |
| 82 | 319 | pep->solvematcoeffs[pep->nmat-1] = 1.0; | |
| 83 | } | ||
| 84 | } | ||
| 85 |
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990 | PetscCall(BVDestroy(&ctx->V)); |
| 86 |
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990 | PetscCall(BVCreateTensor(pep->V,pep->nmat-1,&ctx->V)); |
| 87 |
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194 | PetscFunctionReturn(PETSC_SUCCESS); |
| 88 | } | ||
| 89 | |||
| 90 | /* | ||
| 91 | Extend the TOAR basis by applying the matrix operator | ||
| 92 | over a vector which is decomposed in the TOAR way | ||
| 93 | Input: | ||
| 94 | - pbc: array containing the polynomial basis coefficients | ||
| 95 | - S,V: define the latest Arnoldi vector (nv vectors in V) | ||
| 96 | Output: | ||
| 97 | - t: new vector extending the TOAR basis | ||
| 98 | - r: temporary coefficients to compute the TOAR coefficients | ||
| 99 | for the new Arnoldi vector | ||
| 100 | Workspace: t_ (two vectors) | ||
| 101 | */ | ||
| 102 | 97791 | static PetscErrorCode PEPTOARExtendBasis(PEP pep,PetscBool sinvert,PetscScalar sigma,PetscScalar *S,PetscInt ls,PetscInt nv,BV V,Vec t,PetscScalar *r,PetscInt lr,Vec *t_) | |
| 103 | { | ||
| 104 | 97791 | PetscInt nmat=pep->nmat,deg=nmat-1,k,j,off=0,lss; | |
| 105 | 97791 | Vec v=t_[0],ve=t_[1],q=t_[2]; | |
| 106 | 97791 | PetscScalar alpha=1.0,*ss,a; | |
| 107 | 97791 | PetscReal *ca=pep->pbc,*cb=pep->pbc+nmat,*cg=pep->pbc+2*nmat; | |
| 108 | 97791 | PetscBool flg; | |
| 109 | |||
| 110 |
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97791 | PetscFunctionBegin; |
| 111 |
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97791 | PetscCall(BVSetActiveColumns(pep->V,0,nv)); |
| 112 |
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97791 | PetscCall(STGetTransform(pep->st,&flg)); |
| 113 |
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97791 | if (sinvert) { |
| 114 |
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1408694 | for (j=0;j<nv;j++) { |
| 115 |
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1343139 | if (deg>1) r[lr+j] = S[j]/ca[0]; |
| 116 |
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1343139 | if (deg>2) r[2*lr+j] = (S[ls+j]+(sigma-cb[1])*r[lr+j])/ca[1]; |
| 117 | } | ||
| 118 |
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321005 | for (k=2;k<deg-1;k++) { |
| 119 |
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6830223 | for (j=0;j<nv;j++) r[(k+1)*lr+j] = (S[k*ls+j]+(sigma-cb[k])*r[k*lr+j]-cg[k]*r[(k-1)*lr+j])/ca[k]; |
| 120 | } | ||
| 121 | 1408694 | k = deg-1; | |
| 122 |
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1408694 | for (j=0;j<nv;j++) r[j] = (S[k*ls+j]+(sigma-cb[k])*r[k*lr+j]-cg[k]*r[(k-1)*lr+j])/ca[k]; |
| 123 | 65555 | ss = r; lss = lr; off = 1; alpha = -1.0; a = pep->sfactor; | |
| 124 | } else { | ||
| 125 | 32236 | ss = S; lss = ls; off = 0; alpha = -ca[deg-1]; a = 1.0; | |
| 126 | } | ||
| 127 |
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97791 | PetscCall(BVMultVec(V,1.0,0.0,v,ss+off*lss)); |
| 128 |
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97791 | if (PetscUnlikely(pep->Dr)) { /* balancing */ |
| 129 |
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14983 | PetscCall(VecPointwiseMult(v,v,pep->Dr)); |
| 130 | } | ||
| 131 |
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97791 | PetscCall(STMatMult(pep->st,off,v,q)); |
| 132 |
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97791 | PetscCall(VecScale(q,a)); |
| 133 |
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387149 | for (j=1+off;j<deg+off-1;j++) { |
| 134 |
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289358 | PetscCall(BVMultVec(V,1.0,0.0,v,ss+j*lss)); |
| 135 |
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289358 | if (PetscUnlikely(pep->Dr)) PetscCall(VecPointwiseMult(v,v,pep->Dr)); |
| 136 |
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289358 | PetscCall(STMatMult(pep->st,j,v,t)); |
| 137 | 289358 | a *= pep->sfactor; | |
| 138 |
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289358 | PetscCall(VecAXPY(q,a,t)); |
| 139 | } | ||
| 140 |
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97791 | if (sinvert) { |
| 141 |
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65555 | PetscCall(BVMultVec(V,1.0,0.0,v,ss)); |
| 142 |
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65555 | if (PetscUnlikely(pep->Dr)) PetscCall(VecPointwiseMult(v,v,pep->Dr)); |
| 143 |
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65555 | PetscCall(STMatMult(pep->st,deg,v,t)); |
| 144 | 65555 | a *= pep->sfactor; | |
| 145 |
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65555 | PetscCall(VecAXPY(q,a,t)); |
| 146 | } else { | ||
| 147 |
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32236 | PetscCall(BVMultVec(V,1.0,0.0,ve,ss+(deg-1)*lss)); |
| 148 |
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32236 | if (PetscUnlikely(pep->Dr)) PetscCall(VecPointwiseMult(ve,ve,pep->Dr)); |
| 149 | 32236 | a *= pep->sfactor; | |
| 150 |
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32236 | PetscCall(STMatMult(pep->st,deg-1,ve,t)); |
| 151 |
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32236 | PetscCall(VecAXPY(q,a,t)); |
| 152 | 32236 | a *= pep->sfactor; | |
| 153 | } | ||
| 154 |
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97791 | if (flg || !sinvert) alpha /= a; |
| 155 |
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97791 | PetscCall(STMatSolve(pep->st,q,t)); |
| 156 |
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97791 | PetscCall(VecScale(t,alpha)); |
| 157 |
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97791 | if (!sinvert) { |
| 158 |
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32236 | PetscCall(VecAXPY(t,cg[deg-1],v)); |
| 159 |
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32236 | PetscCall(VecAXPY(t,cb[deg-1],ve)); |
| 160 | } | ||
| 161 |
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97791 | if (PetscUnlikely(pep->Dr)) PetscCall(VecPointwiseDivide(t,t,pep->Dr)); |
| 162 |
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19090 | PetscFunctionReturn(PETSC_SUCCESS); |
| 163 | } | ||
| 164 | |||
| 165 | /* | ||
| 166 | Compute TOAR coefficients of the blocks of the new Arnoldi vector computed | ||
| 167 | */ | ||
| 168 | 97791 | static PetscErrorCode PEPTOARCoefficients(PEP pep,PetscBool sinvert,PetscScalar sigma,PetscInt nv,PetscScalar *S,PetscInt ls,PetscScalar *r,PetscInt lr,PetscScalar *x) | |
| 169 | { | ||
| 170 | 97791 | PetscInt k,j,nmat=pep->nmat,d=nmat-1; | |
| 171 | 97791 | PetscReal *ca=pep->pbc,*cb=pep->pbc+nmat,*cg=pep->pbc+2*nmat; | |
| 172 | 97791 | PetscScalar t=1.0,tp=0.0,tt; | |
| 173 | |||
| 174 |
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97791 | PetscFunctionBegin; |
| 175 |
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97791 | if (sinvert) { |
| 176 |
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417848 | for (k=1;k<d;k++) { |
| 177 | 352293 | tt = t; | |
| 178 | 352293 | t = ((sigma-cb[k-1])*t-cg[k-1]*tp)/ca[k-1]; /* k-th basis polynomial */ | |
| 179 | 352293 | tp = tt; | |
| 180 |
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9324481 | for (j=0;j<=nv;j++) r[k*lr+j] += t*x[j]; |
| 181 | } | ||
| 182 | } else { | ||
| 183 |
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623361 | for (j=0;j<=nv;j++) r[j] = (cb[0]-sigma)*S[j]+ca[0]*S[ls+j]; |
| 184 |
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34856 | for (k=1;k<d-1;k++) { |
| 185 |
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48300 | for (j=0;j<=nv;j++) r[k*lr+j] = (cb[k]-sigma)*S[k*ls+j]+ca[k]*S[(k+1)*ls+j]+cg[k]*S[(k-1)*ls+j]; |
| 186 | } | ||
| 187 |
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32236 | if (sigma!=0.0) for (j=0;j<=nv;j++) r[(d-1)*lr+j] -= sigma*S[(d-1)*ls+j]; |
| 188 | } | ||
| 189 |
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97791 | PetscFunctionReturn(PETSC_SUCCESS); |
| 190 | } | ||
| 191 | |||
| 192 | /* | ||
| 193 | Compute a run of Arnoldi iterations dim(work)=ld | ||
| 194 | */ | ||
| 195 | 8893 | static PetscErrorCode PEPTOARrun(PEP pep,PetscScalar sigma,Mat A,PetscInt k,PetscInt *M,PetscReal *beta,PetscBool *breakdown,Vec *t_) | |
| 196 | { | ||
| 197 | 8893 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 198 | 8893 | PetscInt j,m=*M,deg=pep->nmat-1,ld; | |
| 199 | 8893 | PetscInt ldh,lds,nqt,l; | |
| 200 | 8893 | Vec t; | |
| 201 | 8893 | PetscReal norm=0.0; | |
| 202 | 8893 | PetscBool flg,sinvert=PETSC_FALSE,lindep; | |
| 203 | 8893 | PetscScalar *H,*x,*S; | |
| 204 | 8893 | Mat MS; | |
| 205 | |||
| 206 |
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8893 | PetscFunctionBegin; |
| 207 | 8893 | *beta = 0.0; | |
| 208 |
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8893 | PetscCall(MatDenseGetArray(A,&H)); |
| 209 |
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8893 | PetscCall(MatDenseGetLDA(A,&ldh)); |
| 210 |
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8893 | PetscCall(BVTensorGetFactors(ctx->V,NULL,&MS)); |
| 211 |
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8893 | PetscCall(MatDenseGetArray(MS,&S)); |
| 212 |
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8893 | PetscCall(BVGetSizes(pep->V,NULL,NULL,&ld)); |
| 213 | 8893 | lds = ld*deg; | |
| 214 |
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8893 | PetscCall(BVGetActiveColumns(pep->V,&l,&nqt)); |
| 215 |
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8893 | PetscCall(STGetTransform(pep->st,&flg)); |
| 216 |
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8893 | if (!flg) { |
| 217 | /* spectral transformation handled by the solver */ | ||
| 218 |
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7983 | PetscCall(PetscObjectTypeCompareAny((PetscObject)pep->st,&flg,STSINVERT,STSHIFT,"")); |
| 219 |
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7983 | PetscCheck(flg,PetscObjectComm((PetscObject)pep),PETSC_ERR_SUP,"ST type not supported for TOAR without transforming matrices"); |
| 220 |
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7983 | PetscCall(PetscObjectTypeCompare((PetscObject)pep->st,STSINVERT,&sinvert)); |
| 221 | } | ||
| 222 |
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8893 | PetscCall(BVSetActiveColumns(ctx->V,0,m)); |
| 223 |
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106664 | for (j=k;j<m;j++) { |
| 224 | /* apply operator */ | ||
| 225 |
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97791 | PetscCall(BVGetColumn(pep->V,nqt,&t)); |
| 226 |
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97791 | PetscCall(PEPTOARExtendBasis(pep,sinvert,sigma,S+j*lds,ld,nqt,pep->V,t,S+(j+1)*lds,ld,t_)); |
| 227 |
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97791 | PetscCall(BVRestoreColumn(pep->V,nqt,&t)); |
| 228 | |||
| 229 | /* orthogonalize */ | ||
| 230 |
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97791 | if (sinvert) x = S+(j+1)*lds; |
| 231 | 32236 | else x = S+(deg-1)*ld+(j+1)*lds; | |
| 232 |
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97791 | PetscCall(BVOrthogonalizeColumn(pep->V,nqt,x,&norm,&lindep)); |
| 233 |
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97791 | if (!lindep) { |
| 234 | 89874 | x[nqt] = norm; | |
| 235 |
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89874 | PetscCall(BVScaleColumn(pep->V,nqt,1.0/norm)); |
| 236 | 89874 | nqt++; | |
| 237 | } | ||
| 238 | |||
| 239 |
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97791 | PetscCall(PEPTOARCoefficients(pep,sinvert,sigma,nqt-1,S+j*lds,ld,S+(j+1)*lds,ld,x)); |
| 240 | |||
| 241 | /* level-2 orthogonalization */ | ||
| 242 |
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97791 | PetscCall(BVOrthogonalizeColumn(ctx->V,j+1,H+j*ldh,&norm,breakdown)); |
| 243 | 97791 | H[j+1+ldh*j] = norm; | |
| 244 |
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97791 | if (PetscUnlikely(*breakdown)) { |
| 245 | 20 | *M = j+1; | |
| 246 | 20 | break; | |
| 247 | } | ||
| 248 |
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97771 | PetscCall(BVScaleColumn(ctx->V,j+1,1.0/norm)); |
| 249 |
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97771 | PetscCall(BVSetActiveColumns(pep->V,l,nqt)); |
| 250 | } | ||
| 251 | 8893 | *beta = norm; | |
| 252 |
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8893 | PetscCall(BVSetActiveColumns(ctx->V,0,*M)); |
| 253 |
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8893 | PetscCall(MatDenseRestoreArray(MS,&S)); |
| 254 |
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8893 | PetscCall(BVTensorRestoreFactors(ctx->V,NULL,&MS)); |
| 255 |
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8893 | PetscCall(MatDenseRestoreArray(A,&H)); |
| 256 |
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1734 | PetscFunctionReturn(PETSC_SUCCESS); |
| 257 | } | ||
| 258 | |||
| 259 | /* | ||
| 260 | Computes T_j = phi_idx(T). In T_j and T_p are phi_{idx-1}(T) | ||
| 261 | and phi_{idx-2}(T) respectively or null if idx=0,1. | ||
| 262 | Tp and Tj are input/output arguments | ||
| 263 | */ | ||
| 264 | 50 | static PetscErrorCode PEPEvaluateBasisM(PEP pep,PetscInt k,PetscScalar *T,PetscInt ldt,PetscInt idx,PetscScalar **Tp,PetscScalar **Tj) | |
| 265 | { | ||
| 266 | 50 | PetscInt i; | |
| 267 | 50 | PetscReal *ca,*cb,*cg; | |
| 268 | 50 | PetscScalar *pt,g,a; | |
| 269 | 50 | PetscBLASInt k_,ldt_; | |
| 270 | |||
| 271 |
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50 | PetscFunctionBegin; |
| 272 |
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50 | if (idx==0) { |
| 273 |
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10 | PetscCall(PetscArrayzero(*Tj,k*k)); |
| 274 |
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10 | PetscCall(PetscArrayzero(*Tp,k*k)); |
| 275 |
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145 | for (i=0;i<k;i++) (*Tj)[i+i*k] = 1.0; |
| 276 | } else { | ||
| 277 |
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40 | PetscCall(PetscBLASIntCast(ldt,&ldt_)); |
| 278 |
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40 | PetscCall(PetscBLASIntCast(k,&k_)); |
| 279 | 40 | ca = pep->pbc; cb = pep->pbc+pep->nmat; cg = pep->pbc+2*pep->nmat; | |
| 280 |
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580 | for (i=0;i<k;i++) T[i*ldt+i] -= cb[idx-1]; |
| 281 | 40 | a = 1/ca[idx-1]; | |
| 282 |
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40 | g = (idx==1)?0.0:-cg[idx-1]/ca[idx-1]; |
| 283 |
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40 | PetscCallBLAS("BLASgemm",BLASgemm_("N","N",&k_,&k_,&k_,&a,T,&ldt_,*Tj,&k_,&g,*Tp,&k_)); |
| 284 | 40 | pt = *Tj; *Tj = *Tp; *Tp = pt; | |
| 285 |
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580 | for (i=0;i<k;i++) T[i*ldt+i] += cb[idx-1]; |
| 286 | } | ||
| 287 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 288 | } | ||
| 289 | |||
| 290 | 140 | static PetscErrorCode PEPExtractInvariantPair(PEP pep,PetscScalar sigma,PetscInt sr,PetscInt k,PetscScalar *S,PetscInt ld,PetscInt deg,Mat HH) | |
| 291 | { | ||
| 292 | 140 | PetscInt i,j,jj,ldh,lds,ldt,d=pep->nmat-1,idxcpy=0; | |
| 293 | 140 | PetscScalar *H,*At,*Bt,*Hj,*Hp,*T,sone=1.0,g,a,*pM,*work; | |
| 294 | 140 | PetscBLASInt k_,sr_,lds_,ldh_,info,*p,lwork,ldt_; | |
| 295 | 140 | PetscBool transf=PETSC_FALSE,flg; | |
| 296 | 140 | PetscReal norm,maxnrm,*rwork; | |
| 297 | 140 | BV *R,Y; | |
| 298 | 140 | Mat M,*A; | |
| 299 | |||
| 300 |
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140 | PetscFunctionBegin; |
| 301 |
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140 | if (k==0) PetscFunctionReturn(PETSC_SUCCESS); |
| 302 |
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140 | PetscCall(MatDenseGetArray(HH,&H)); |
| 303 |
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140 | PetscCall(MatDenseGetLDA(HH,&ldh)); |
| 304 | 140 | lds = deg*ld; | |
| 305 |
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140 | PetscCall(PetscCalloc6(k,&p,sr*k,&At,k*k,&Bt,k*k,&Hj,k*k,&Hp,sr*k,&work)); |
| 306 |
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140 | PetscCall(PetscBLASIntCast(sr,&sr_)); |
| 307 |
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140 | PetscCall(PetscBLASIntCast(k,&k_)); |
| 308 |
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140 | PetscCall(PetscBLASIntCast(lds,&lds_)); |
| 309 |
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140 | PetscCall(PetscBLASIntCast(ldh,&ldh_)); |
| 310 |
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140 | PetscCall(STGetTransform(pep->st,&flg)); |
| 311 |
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140 | if (!flg) { |
| 312 |
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110 | PetscCall(PetscObjectTypeCompare((PetscObject)pep->st,STSINVERT,&flg)); |
| 313 |
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110 | if (flg || sigma!=0.0) transf=PETSC_TRUE; |
| 314 | } | ||
| 315 | 70 | if (transf) { | |
| 316 |
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70 | PetscCall(PetscMalloc1(k*k,&T)); |
| 317 | 420 | ldt = k; | |
| 318 |
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420 | for (i=0;i<k;i++) PetscCall(PetscArraycpy(T+k*i,H+i*ldh,k)); |
| 319 |
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70 | if (flg) { |
| 320 |
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70 | PetscCall(PetscFPTrapPush(PETSC_FP_TRAP_OFF)); |
| 321 |
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70 | PetscCallBLAS("LAPACKgetrf",LAPACKgetrf_(&k_,&k_,T,&k_,p,&info)); |
| 322 |
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70 | SlepcCheckLapackInfo("getrf",info); |
| 323 |
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70 | PetscCall(PetscBLASIntCast(sr*k,&lwork)); |
| 324 |
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70 | PetscCallBLAS("LAPACKgetri",LAPACKgetri_(&k_,T,&k_,p,work,&lwork,&info)); |
| 325 |
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70 | SlepcCheckLapackInfo("getri",info); |
| 326 |
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70 | PetscCall(PetscFPTrapPop()); |
| 327 | } | ||
| 328 |
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420 | if (sigma!=0.0) for (i=0;i<k;i++) T[i+k*i] += sigma; |
| 329 | } else { | ||
| 330 | 70 | T = H; ldt = ldh; | |
| 331 | } | ||
| 332 |
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140 | PetscCall(PetscBLASIntCast(ldt,&ldt_)); |
| 333 |
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140 | switch (pep->extract) { |
| 334 | case PEP_EXTRACT_NONE: | ||
| 335 | break; | ||
| 336 | 110 | case PEP_EXTRACT_NORM: | |
| 337 |
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110 | if (pep->basis == PEP_BASIS_MONOMIAL) { |
| 338 |
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110 | PetscCall(PetscBLASIntCast(ldt,&ldt_)); |
| 339 |
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110 | PetscCall(PetscMalloc1(k,&rwork)); |
| 340 | 110 | norm = LAPACKlange_("F",&k_,&k_,T,&ldt_,rwork); | |
| 341 |
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110 | PetscCall(PetscFree(rwork)); |
| 342 |
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110 | if (norm>1.0) idxcpy = d-1; |
| 343 | } else { | ||
| 344 | ✗ | PetscCall(PetscBLASIntCast(ldt,&ldt_)); | |
| 345 | ✗ | PetscCall(PetscMalloc1(k,&rwork)); | |
| 346 | maxnrm = 0.0; | ||
| 347 | ✗ | for (i=0;i<pep->nmat-1;i++) { | |
| 348 | ✗ | PetscCall(PEPEvaluateBasisM(pep,k,T,ldt,i,&Hp,&Hj)); | |
| 349 | ✗ | norm = LAPACKlange_("F",&k_,&k_,Hj,&k_,rwork); | |
| 350 | ✗ | if (norm > maxnrm) { | |
| 351 | ✗ | idxcpy = i; | |
| 352 | ✗ | maxnrm = norm; | |
| 353 | } | ||
| 354 | } | ||
| 355 | ✗ | PetscCall(PetscFree(rwork)); | |
| 356 | } | ||
| 357 |
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110 | if (idxcpy>0) { |
| 358 | /* copy block idxcpy of S to the first one */ | ||
| 359 |
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|
790 | for (j=0;j<k;j++) PetscCall(PetscArraycpy(S+j*lds,S+idxcpy*ld+j*lds,sr)); |
| 360 | } | ||
| 361 | break; | ||
| 362 | 10 | case PEP_EXTRACT_RESIDUAL: | |
| 363 |
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10 | PetscCall(STGetTransform(pep->st,&flg)); |
| 364 |
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10 | if (flg) { |
| 365 | ✗ | PetscCall(PetscMalloc1(pep->nmat,&A)); | |
| 366 | ✗ | for (i=0;i<pep->nmat;i++) PetscCall(STGetMatrixTransformed(pep->st,i,A+i)); | |
| 367 | 10 | } else A = pep->A; | |
| 368 |
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10 | PetscCall(PetscMalloc1(pep->nmat-1,&R)); |
| 369 |
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30 | for (i=0;i<pep->nmat-1;i++) PetscCall(BVDuplicateResize(pep->V,k,R+i)); |
| 370 |
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10 | PetscCall(BVDuplicateResize(pep->V,sr,&Y)); |
| 371 |
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10 | PetscCall(MatCreateSeqDense(PETSC_COMM_SELF,sr,k,NULL,&M)); |
| 372 | 10 | g = 0.0; a = 1.0; | |
| 373 |
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10 | PetscCall(BVSetActiveColumns(pep->V,0,sr)); |
| 374 |
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40 | for (j=0;j<pep->nmat;j++) { |
| 375 |
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30 | PetscCall(BVMatMult(pep->V,A[j],Y)); |
| 376 |
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30 | PetscCall(PEPEvaluateBasisM(pep,k,T,ldt,i,&Hp,&Hj)); |
| 377 |
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90 | for (i=0;i<pep->nmat-1;i++) { |
| 378 |
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|
60 | PetscCallBLAS("BLASgemm",BLASgemm_("N","N",&sr_,&k_,&k_,&a,S+i*ld,&lds_,Hj,&k_,&g,At,&sr_)); |
| 379 |
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60 | PetscCall(MatDenseGetArray(M,&pM)); |
| 380 |
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870 | for (jj=0;jj<k;jj++) PetscCall(PetscArraycpy(pM+jj*sr,At+jj*sr,sr)); |
| 381 |
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60 | PetscCall(MatDenseRestoreArray(M,&pM)); |
| 382 |
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90 | PetscCall(BVMult(R[i],1.0,(i==0)?0.0:1.0,Y,M)); |
| 383 | } | ||
| 384 | } | ||
| 385 | |||
| 386 | /* frobenius norm */ | ||
| 387 | maxnrm = 0.0; | ||
| 388 |
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30 | for (i=0;i<pep->nmat-1;i++) { |
| 389 |
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20 | PetscCall(BVNorm(R[i],NORM_FROBENIUS,&norm)); |
| 390 |
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20 | if (maxnrm > norm) { |
| 391 | ✗ | maxnrm = norm; | |
| 392 | ✗ | idxcpy = i; | |
| 393 | } | ||
| 394 | } | ||
| 395 |
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10 | if (idxcpy>0) { |
| 396 | /* copy block idxcpy of S to the first one */ | ||
| 397 | ✗ | for (j=0;j<k;j++) PetscCall(PetscArraycpy(S+j*lds,S+idxcpy*ld+j*lds,sr)); | |
| 398 | } | ||
| 399 |
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10 | if (flg) PetscCall(PetscFree(A)); |
| 400 |
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30 | for (i=0;i<pep->nmat-1;i++) PetscCall(BVDestroy(&R[i])); |
| 401 |
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10 | PetscCall(PetscFree(R)); |
| 402 |
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10 | PetscCall(BVDestroy(&Y)); |
| 403 |
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10 | PetscCall(MatDestroy(&M)); |
| 404 | break; | ||
| 405 | case PEP_EXTRACT_STRUCTURED: | ||
| 406 |
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145 | for (j=0;j<k;j++) Bt[j+j*k] = 1.0; |
| 407 |
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145 | for (j=0;j<sr;j++) { |
| 408 |
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1960 | for (i=0;i<k;i++) At[j*k+i] = PetscConj(S[i*lds+j]); |
| 409 | } | ||
| 410 |
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10 | PetscCall(PEPEvaluateBasisM(pep,k,T,ldt,0,&Hp,&Hj)); |
| 411 |
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20 | for (i=1;i<deg;i++) { |
| 412 |
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10 | PetscCall(PEPEvaluateBasisM(pep,k,T,ldt,i,&Hp,&Hj)); |
| 413 |
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10 | PetscCallBLAS("BLASgemm",BLASgemm_("N","C",&k_,&sr_,&k_,&sone,Hj,&k_,S+i*ld,&lds_,&sone,At,&k_)); |
| 414 |
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10 | PetscCallBLAS("BLASgemm",BLASgemm_("N","C",&k_,&k_,&k_,&sone,Hj,&k_,Hj,&k_,&sone,Bt,&k_)); |
| 415 | } | ||
| 416 |
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10 | PetscCall(PetscFPTrapPush(PETSC_FP_TRAP_OFF)); |
| 417 |
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10 | PetscCallBLAS("LAPACKgesv",LAPACKgesv_(&k_,&sr_,Bt,&k_,p,At,&k_,&info)); |
| 418 |
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10 | PetscCall(PetscFPTrapPop()); |
| 419 |
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10 | SlepcCheckLapackInfo("gesv",info); |
| 420 |
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145 | for (j=0;j<sr;j++) { |
| 421 |
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1960 | for (i=0;i<k;i++) S[i*lds+j] = PetscConj(At[j*k+i]); |
| 422 | } | ||
| 423 | break; | ||
| 424 | } | ||
| 425 |
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140 | if (transf) PetscCall(PetscFree(T)); |
| 426 |
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140 | PetscCall(PetscFree6(p,At,Bt,Hj,Hp,work)); |
| 427 |
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140 | PetscCall(MatDenseRestoreArray(HH,&H)); |
| 428 |
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28 | PetscFunctionReturn(PETSC_SUCCESS); |
| 429 | } | ||
| 430 | |||
| 431 | 990 | static PetscErrorCode PEPSolve_TOAR(PEP pep) | |
| 432 | { | ||
| 433 | 990 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 434 | 990 | PetscInt i,j,k,l,nv=0,ld,lds,nq=0,nconv=0; | |
| 435 | 990 | PetscInt nmat=pep->nmat,deg=nmat-1; | |
| 436 | 990 | PetscScalar *S,sigma; | |
| 437 | 990 | PetscReal beta; | |
| 438 | 990 | PetscBool breakdown=PETSC_FALSE,flg,falselock=PETSC_FALSE,sinv=PETSC_FALSE; | |
| 439 | 990 | Mat H,MS,MQ; | |
| 440 | |||
| 441 |
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990 | PetscFunctionBegin; |
| 442 |
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990 | PetscCall(PetscCitationsRegister(citation,&cited)); |
| 443 |
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990 | if (ctx->lock) { |
| 444 | /* undocumented option to use a cheaper locking instead of the true locking */ | ||
| 445 |
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980 | PetscCall(PetscOptionsGetBool(NULL,NULL,"-pep_toar_falselocking",&falselock,NULL)); |
| 446 | } | ||
| 447 |
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990 | PetscCall(STGetShift(pep->st,&sigma)); |
| 448 | |||
| 449 | /* update polynomial basis coefficients */ | ||
| 450 |
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990 | PetscCall(STGetTransform(pep->st,&flg)); |
| 451 |
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990 | if (pep->sfactor!=1.0) { |
| 452 |
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144 | for (i=0;i<nmat;i++) { |
| 453 | 108 | pep->pbc[nmat+i] /= pep->sfactor; | |
| 454 | 108 | pep->pbc[2*nmat+i] /= pep->sfactor*pep->sfactor; | |
| 455 | } | ||
| 456 |
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36 | if (!flg) { |
| 457 | 36 | pep->target /= pep->sfactor; | |
| 458 |
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36 | PetscCall(RGPushScale(pep->rg,1.0/pep->sfactor)); |
| 459 |
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36 | PetscCall(STScaleShift(pep->st,1.0/pep->sfactor)); |
| 460 | 36 | sigma /= pep->sfactor; | |
| 461 | } else { | ||
| 462 | ✗ | PetscCall(PetscObjectTypeCompare((PetscObject)pep->st,STSINVERT,&sinv)); | |
| 463 | ✗ | pep->target = sinv?pep->target*pep->sfactor:pep->target/pep->sfactor; | |
| 464 | ✗ | PetscCall(RGPushScale(pep->rg,sinv?pep->sfactor:1.0/pep->sfactor)); | |
| 465 | ✗ | PetscCall(STScaleShift(pep->st,sinv?pep->sfactor:1.0/pep->sfactor)); | |
| 466 | } | ||
| 467 | } | ||
| 468 | |||
| 469 |
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990 | if (flg) sigma = 0.0; |
| 470 | |||
| 471 | /* clean projected matrix (including the extra-arrow) */ | ||
| 472 |
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990 | PetscCall(DSSetDimensions(pep->ds,PETSC_DETERMINE,PETSC_DETERMINE,PETSC_DETERMINE)); |
| 473 |
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990 | PetscCall(DSGetMat(pep->ds,DS_MAT_A,&H)); |
| 474 |
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990 | PetscCall(MatZeroEntries(H)); |
| 475 |
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990 | PetscCall(DSRestoreMat(pep->ds,DS_MAT_A,&H)); |
| 476 | |||
| 477 | /* Get the starting Arnoldi vector */ | ||
| 478 |
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990 | PetscCall(BVTensorBuildFirstColumn(ctx->V,pep->nini)); |
| 479 | |||
| 480 | /* restart loop */ | ||
| 481 | 990 | l = 0; | |
| 482 | 990 | while (pep->reason == PEP_CONVERGED_ITERATING) { | |
| 483 | 8893 | pep->its++; | |
| 484 | |||
| 485 | /* compute an nv-step Lanczos factorization */ | ||
| 486 | 8893 | nv = PetscMax(PetscMin(nconv+pep->mpd,pep->ncv),nv); | |
| 487 |
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|
8893 | PetscCall(DSGetMat(pep->ds,DS_MAT_A,&H)); |
| 488 |
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|
8893 | PetscCall(PEPTOARrun(pep,sigma,H,pep->nconv+l,&nv,&beta,&breakdown,pep->work)); |
| 489 |
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|
8893 | PetscCall(DSRestoreMat(pep->ds,DS_MAT_A,&H)); |
| 490 |
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|
8893 | PetscCall(DSSetDimensions(pep->ds,nv,pep->nconv,pep->nconv+l)); |
| 491 |
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|
8893 | PetscCall(DSSetState(pep->ds,l?DS_STATE_RAW:DS_STATE_INTERMEDIATE)); |
| 492 |
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|
8893 | PetscCall(BVSetActiveColumns(ctx->V,pep->nconv,nv)); |
| 493 | |||
| 494 | /* solve projected problem */ | ||
| 495 |
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|
8893 | PetscCall(DSSolve(pep->ds,pep->eigr,pep->eigi)); |
| 496 |
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|
8893 | PetscCall(DSSort(pep->ds,pep->eigr,pep->eigi,NULL,NULL,NULL)); |
| 497 |
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|
8893 | PetscCall(DSUpdateExtraRow(pep->ds)); |
| 498 |
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|
8893 | PetscCall(DSSynchronize(pep->ds,pep->eigr,pep->eigi)); |
| 499 | |||
| 500 | /* check convergence */ | ||
| 501 |
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|
8893 | PetscCall(PEPKrylovConvergence(pep,PETSC_FALSE,pep->nconv,nv-pep->nconv,beta,&k)); |
| 502 |
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|
8893 | PetscCall((*pep->stopping)(pep,pep->its,pep->max_it,k,pep->nev,&pep->reason,pep->stoppingctx)); |
| 503 | |||
| 504 | /* update l */ | ||
| 505 |
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|
8893 | if (pep->reason != PEP_CONVERGED_ITERATING || breakdown) l = 0; |
| 506 | else { | ||
| 507 |
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|
7903 | l = (nv==k)?0:PetscMax(1,(PetscInt)((nv-k)*ctx->keep)); |
| 508 |
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|
7903 | PetscCall(DSGetTruncateSize(pep->ds,k,nv,&l)); |
| 509 |
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7903 | if (!breakdown) { |
| 510 | /* prepare the Rayleigh quotient for restart */ | ||
| 511 |
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|
7903 | PetscCall(DSTruncate(pep->ds,k+l,PETSC_FALSE)); |
| 512 | } | ||
| 513 | } | ||
| 514 | 8893 | nconv = k; | |
| 515 |
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|
8893 | if (!ctx->lock && pep->reason == PEP_CONVERGED_ITERATING && !breakdown) { l += k; k = 0; } /* non-locking variant: reset no. of converged pairs */ |
| 516 |
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|
8893 | if (l) PetscCall(PetscInfo(pep,"Preparing to restart keeping l=%" PetscInt_FMT " vectors\n",l)); |
| 517 | |||
| 518 | /* update S */ | ||
| 519 |
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|
8893 | PetscCall(DSGetMat(pep->ds,DS_MAT_Q,&MQ)); |
| 520 |
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|
8893 | PetscCall(BVMultInPlace(ctx->V,MQ,pep->nconv,k+l)); |
| 521 |
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|
8893 | PetscCall(DSRestoreMat(pep->ds,DS_MAT_Q,&MQ)); |
| 522 | |||
| 523 | /* copy last column of S */ | ||
| 524 |
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|
8893 | PetscCall(BVCopyColumn(ctx->V,nv,k+l)); |
| 525 | |||
| 526 |
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|
8893 | if (PetscUnlikely(breakdown && pep->reason == PEP_CONVERGED_ITERATING)) { |
| 527 | /* stop if breakdown */ | ||
| 528 | ✗ | PetscCall(PetscInfo(pep,"Breakdown TOAR method (it=%" PetscInt_FMT " norm=%g)\n",pep->its,(double)beta)); | |
| 529 | ✗ | pep->reason = PEP_DIVERGED_BREAKDOWN; | |
| 530 | } | ||
| 531 |
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8893 | if (pep->reason != PEP_CONVERGED_ITERATING) l--; |
| 532 | /* truncate S */ | ||
| 533 |
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8893 | PetscCall(BVGetActiveColumns(pep->V,NULL,&nq)); |
| 534 |
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8893 | if (k+l+deg<=nq) { |
| 535 |
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8370 | PetscCall(BVSetActiveColumns(ctx->V,pep->nconv,k+l+1)); |
| 536 |
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|
8370 | if (!falselock && ctx->lock) PetscCall(BVTensorCompress(ctx->V,k-pep->nconv)); |
| 537 |
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|
70 | else PetscCall(BVTensorCompress(ctx->V,0)); |
| 538 | } | ||
| 539 | 8893 | pep->nconv = k; | |
| 540 |
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|
9883 | PetscCall(PEPMonitor(pep,pep->its,nconv,pep->eigr,pep->eigi,pep->errest,nv)); |
| 541 | } | ||
| 542 |
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990 | if (pep->nconv>0) { |
| 543 | /* {V*S_nconv^i}_{i=0}^{d-1} has rank nconv instead of nconv+d-1. Force zeros in each S_nconv^i block */ | ||
| 544 |
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990 | PetscCall(BVSetActiveColumns(ctx->V,0,pep->nconv)); |
| 545 |
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990 | PetscCall(BVGetActiveColumns(pep->V,NULL,&nq)); |
| 546 |
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990 | PetscCall(BVSetActiveColumns(pep->V,0,nq)); |
| 547 |
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990 | if (nq>pep->nconv) { |
| 548 |
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25 | PetscCall(BVTensorCompress(ctx->V,pep->nconv)); |
| 549 |
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25 | PetscCall(BVSetActiveColumns(pep->V,0,pep->nconv)); |
| 550 | 25 | nq = pep->nconv; | |
| 551 | } | ||
| 552 | |||
| 553 | /* perform Newton refinement if required */ | ||
| 554 |
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990 | if (pep->refine==PEP_REFINE_MULTIPLE && pep->rits>0) { |
| 555 | /* extract invariant pair */ | ||
| 556 |
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140 | PetscCall(BVTensorGetFactors(ctx->V,NULL,&MS)); |
| 557 |
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140 | PetscCall(MatDenseGetArray(MS,&S)); |
| 558 |
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140 | PetscCall(DSGetMat(pep->ds,DS_MAT_A,&H)); |
| 559 |
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140 | PetscCall(BVGetSizes(pep->V,NULL,NULL,&ld)); |
| 560 | 140 | lds = deg*ld; | |
| 561 |
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140 | PetscCall(PEPExtractInvariantPair(pep,sigma,nq,pep->nconv,S,ld,deg,H)); |
| 562 |
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140 | PetscCall(DSRestoreMat(pep->ds,DS_MAT_A,&H)); |
| 563 |
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140 | PetscCall(DSSetDimensions(pep->ds,pep->nconv,0,0)); |
| 564 |
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140 | PetscCall(DSSetState(pep->ds,DS_STATE_RAW)); |
| 565 |
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140 | PetscCall(PEPNewtonRefinement_TOAR(pep,sigma,&pep->rits,NULL,pep->nconv,S,lds)); |
| 566 |
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140 | PetscCall(DSSolve(pep->ds,pep->eigr,pep->eigi)); |
| 567 |
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140 | PetscCall(DSSort(pep->ds,pep->eigr,pep->eigi,NULL,NULL,NULL)); |
| 568 |
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140 | PetscCall(DSSynchronize(pep->ds,pep->eigr,pep->eigi)); |
| 569 |
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140 | PetscCall(DSGetMat(pep->ds,DS_MAT_Q,&MQ)); |
| 570 |
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140 | PetscCall(BVMultInPlace(ctx->V,MQ,0,pep->nconv)); |
| 571 |
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140 | PetscCall(DSRestoreMat(pep->ds,DS_MAT_Q,&MQ)); |
| 572 |
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140 | PetscCall(MatDenseRestoreArray(MS,&S)); |
| 573 |
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140 | PetscCall(BVTensorRestoreFactors(ctx->V,NULL,&MS)); |
| 574 | } | ||
| 575 | } | ||
| 576 |
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990 | PetscCall(STGetTransform(pep->st,&flg)); |
| 577 |
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990 | if (pep->refine!=PEP_REFINE_MULTIPLE || pep->rits==0) { |
| 578 |
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850 | if (!flg) PetscTryTypeMethod(pep,backtransform); |
| 579 |
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850 | if (pep->sfactor!=1.0) { |
| 580 |
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220 | for (j=0;j<pep->nconv;j++) { |
| 581 | 184 | pep->eigr[j] *= pep->sfactor; | |
| 582 | 184 | pep->eigi[j] *= pep->sfactor; | |
| 583 | } | ||
| 584 | /* restore original values */ | ||
| 585 |
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144 | for (i=0;i<pep->nmat;i++) { |
| 586 | 108 | pep->pbc[pep->nmat+i] *= pep->sfactor; | |
| 587 | 108 | pep->pbc[2*pep->nmat+i] *= pep->sfactor*pep->sfactor; | |
| 588 | } | ||
| 589 | } | ||
| 590 | } | ||
| 591 | /* restore original values */ | ||
| 592 |
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990 | if (!flg) { |
| 593 | 880 | pep->target *= pep->sfactor; | |
| 594 |
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880 | PetscCall(STScaleShift(pep->st,pep->sfactor)); |
| 595 | } else { | ||
| 596 |
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110 | PetscCall(STScaleShift(pep->st,sinv?1.0/pep->sfactor:pep->sfactor)); |
| 597 |
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110 | pep->target = (sinv)?pep->target/pep->sfactor:pep->target*pep->sfactor; |
| 598 | } | ||
| 599 |
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|
990 | if (pep->sfactor!=1.0) PetscCall(RGPopScale(pep->rg)); |
| 600 | |||
| 601 | /* change the state to raw so that DSVectors() computes eigenvectors from scratch */ | ||
| 602 |
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990 | PetscCall(DSSetDimensions(pep->ds,pep->nconv,0,0)); |
| 603 |
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990 | PetscCall(DSSetState(pep->ds,DS_STATE_RAW)); |
| 604 |
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|
194 | PetscFunctionReturn(PETSC_SUCCESS); |
| 605 | } | ||
| 606 | |||
| 607 | 20 | static PetscErrorCode PEPTOARSetRestart_TOAR(PEP pep,PetscReal keep) | |
| 608 | { | ||
| 609 | 20 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 610 | |||
| 611 |
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20 | PetscFunctionBegin; |
| 612 |
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20 | if (keep==(PetscReal)PETSC_DEFAULT || keep==(PetscReal)PETSC_DECIDE) ctx->keep = 0.5; |
| 613 | else { | ||
| 614 |
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20 | PetscCheck(keep>=0.1 && keep<=0.9,PetscObjectComm((PetscObject)pep),PETSC_ERR_ARG_OUTOFRANGE,"The keep argument must be in the range [0.1,0.9]"); |
| 615 | 20 | ctx->keep = keep; | |
| 616 | } | ||
| 617 |
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|
4 | PetscFunctionReturn(PETSC_SUCCESS); |
| 618 | } | ||
| 619 | |||
| 620 | /*@ | ||
| 621 | PEPTOARSetRestart - Sets the restart parameter for the TOAR | ||
| 622 | method, in particular the proportion of basis vectors that must be kept | ||
| 623 | after restart. | ||
| 624 | |||
| 625 | Logically Collective | ||
| 626 | |||
| 627 | Input Parameters: | ||
| 628 | + pep - the polynomial eigensolver context | ||
| 629 | - keep - the number of vectors to be kept at restart | ||
| 630 | |||
| 631 | Options Database Key: | ||
| 632 | . -pep_toar_restart \<keep\> - sets the restart parameter | ||
| 633 | |||
| 634 | Note: | ||
| 635 | Allowed values are in the range [0.1,0.9]. The default is 0.5. | ||
| 636 | |||
| 637 | Level: advanced | ||
| 638 | |||
| 639 | .seealso: [](ch:pep), `PEPTOAR`, `PEPTOARGetRestart()` | ||
| 640 | @*/ | ||
| 641 | 20 | PetscErrorCode PEPTOARSetRestart(PEP pep,PetscReal keep) | |
| 642 | { | ||
| 643 |
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20 | PetscFunctionBegin; |
| 644 |
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20 | PetscValidHeaderSpecific(pep,PEP_CLASSID,1); |
| 645 |
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20 | PetscValidLogicalCollectiveReal(pep,keep,2); |
| 646 |
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20 | PetscTryMethod(pep,"PEPTOARSetRestart_C",(PEP,PetscReal),(pep,keep)); |
| 647 |
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|
20 | PetscFunctionReturn(PETSC_SUCCESS); |
| 648 | } | ||
| 649 | |||
| 650 | 10 | static PetscErrorCode PEPTOARGetRestart_TOAR(PEP pep,PetscReal *keep) | |
| 651 | { | ||
| 652 | 10 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 653 | |||
| 654 |
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10 | PetscFunctionBegin; |
| 655 | 10 | *keep = ctx->keep; | |
| 656 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 657 | } | ||
| 658 | |||
| 659 | /*@ | ||
| 660 | PEPTOARGetRestart - Gets the restart parameter used in the TOAR method. | ||
| 661 | |||
| 662 | Not Collective | ||
| 663 | |||
| 664 | Input Parameter: | ||
| 665 | . pep - the polynomial eigensolver context | ||
| 666 | |||
| 667 | Output Parameter: | ||
| 668 | . keep - the restart parameter | ||
| 669 | |||
| 670 | Level: advanced | ||
| 671 | |||
| 672 | .seealso: [](ch:pep), `PEPTOAR`, `PEPTOARSetRestart()` | ||
| 673 | @*/ | ||
| 674 | 10 | PetscErrorCode PEPTOARGetRestart(PEP pep,PetscReal *keep) | |
| 675 | { | ||
| 676 |
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10 | PetscFunctionBegin; |
| 677 |
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10 | PetscValidHeaderSpecific(pep,PEP_CLASSID,1); |
| 678 |
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10 | PetscAssertPointer(keep,2); |
| 679 |
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10 | PetscUseMethod(pep,"PEPTOARGetRestart_C",(PEP,PetscReal*),(pep,keep)); |
| 680 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 681 | } | ||
| 682 | |||
| 683 | 10 | static PetscErrorCode PEPTOARSetLocking_TOAR(PEP pep,PetscBool lock) | |
| 684 | { | ||
| 685 | 10 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 686 | |||
| 687 |
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10 | PetscFunctionBegin; |
| 688 | 10 | ctx->lock = lock; | |
| 689 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 690 | } | ||
| 691 | |||
| 692 | /*@ | ||
| 693 | PEPTOARSetLocking - Choose between locking and non-locking variants of | ||
| 694 | the TOAR method. | ||
| 695 | |||
| 696 | Logically Collective | ||
| 697 | |||
| 698 | Input Parameters: | ||
| 699 | + pep - the polynomial eigensolver context | ||
| 700 | - lock - `PETSC_TRUE` if the locking variant must be selected | ||
| 701 | |||
| 702 | Options Database Key: | ||
| 703 | . -pep_toar_locking - sets the locking flag | ||
| 704 | |||
| 705 | Note: | ||
| 706 | The default is to lock converged eigenpairs when the method restarts. | ||
| 707 | This behavior can be changed so that all directions are kept in the | ||
| 708 | working subspace even if already converged to working accuracy (the | ||
| 709 | non-locking variant). | ||
| 710 | |||
| 711 | Level: advanced | ||
| 712 | |||
| 713 | .seealso: [](ch:pep), `PEPTOAR`, `PEPTOARGetLocking()` | ||
| 714 | @*/ | ||
| 715 | 10 | PetscErrorCode PEPTOARSetLocking(PEP pep,PetscBool lock) | |
| 716 | { | ||
| 717 |
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10 | PetscFunctionBegin; |
| 718 |
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10 | PetscValidHeaderSpecific(pep,PEP_CLASSID,1); |
| 719 |
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10 | PetscValidLogicalCollectiveBool(pep,lock,2); |
| 720 |
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10 | PetscTryMethod(pep,"PEPTOARSetLocking_C",(PEP,PetscBool),(pep,lock)); |
| 721 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 722 | } | ||
| 723 | |||
| 724 | 10 | static PetscErrorCode PEPTOARGetLocking_TOAR(PEP pep,PetscBool *lock) | |
| 725 | { | ||
| 726 | 10 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 727 | |||
| 728 |
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10 | PetscFunctionBegin; |
| 729 | 10 | *lock = ctx->lock; | |
| 730 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 731 | } | ||
| 732 | |||
| 733 | /*@ | ||
| 734 | PEPTOARGetLocking - Gets the locking flag used in the TOAR method. | ||
| 735 | |||
| 736 | Not Collective | ||
| 737 | |||
| 738 | Input Parameter: | ||
| 739 | . pep - the polynomial eigensolver context | ||
| 740 | |||
| 741 | Output Parameter: | ||
| 742 | . lock - the locking flag | ||
| 743 | |||
| 744 | Level: advanced | ||
| 745 | |||
| 746 | .seealso: [](ch:pep), `PEPTOAR`, `PEPTOARSetLocking()` | ||
| 747 | @*/ | ||
| 748 | 10 | PetscErrorCode PEPTOARGetLocking(PEP pep,PetscBool *lock) | |
| 749 | { | ||
| 750 |
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10 | PetscFunctionBegin; |
| 751 |
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10 | PetscValidHeaderSpecific(pep,PEP_CLASSID,1); |
| 752 |
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10 | PetscAssertPointer(lock,2); |
| 753 |
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10 | PetscUseMethod(pep,"PEPTOARGetLocking_C",(PEP,PetscBool*),(pep,lock)); |
| 754 |
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10 | PetscFunctionReturn(PETSC_SUCCESS); |
| 755 | } | ||
| 756 | |||
| 757 | 947 | static PetscErrorCode PEPSetFromOptions_TOAR(PEP pep,PetscOptionItems PetscOptionsObject) | |
| 758 | { | ||
| 759 | 947 | PetscBool flg,lock; | |
| 760 | 947 | PetscReal keep; | |
| 761 | |||
| 762 |
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947 | PetscFunctionBegin; |
| 763 |
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947 | PetscOptionsHeadBegin(PetscOptionsObject,"PEP TOAR Options"); |
| 764 | |||
| 765 |
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947 | PetscCall(PetscOptionsReal("-pep_toar_restart","Proportion of vectors kept after restart","PEPTOARSetRestart",0.5,&keep,&flg)); |
| 766 |
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947 | if (flg) PetscCall(PEPTOARSetRestart(pep,keep)); |
| 767 | |||
| 768 |
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947 | PetscCall(PetscOptionsBool("-pep_toar_locking","Choose between locking and non-locking variants","PEPTOARSetLocking",PETSC_FALSE,&lock,&flg)); |
| 769 |
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947 | if (flg) PetscCall(PEPTOARSetLocking(pep,lock)); |
| 770 | |||
| 771 |
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947 | PetscOptionsHeadEnd(); |
| 772 |
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182 | PetscFunctionReturn(PETSC_SUCCESS); |
| 773 | } | ||
| 774 | |||
| 775 | 15 | static PetscErrorCode PEPView_TOAR(PEP pep,PetscViewer viewer) | |
| 776 | { | ||
| 777 | 15 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 778 | 15 | PetscBool isascii; | |
| 779 | |||
| 780 |
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15 | PetscFunctionBegin; |
| 781 |
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15 | PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&isascii)); |
| 782 |
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15 | if (isascii) { |
| 783 |
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15 | PetscCall(PetscViewerASCIIPrintf(viewer," %d%% of basis vectors kept after restart\n",(int)(100*ctx->keep))); |
| 784 |
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15 | PetscCall(PetscViewerASCIIPrintf(viewer," using the %slocking variant\n",ctx->lock?"":"non-")); |
| 785 | } | ||
| 786 |
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3 | PetscFunctionReturn(PETSC_SUCCESS); |
| 787 | } | ||
| 788 | |||
| 789 | 974 | static PetscErrorCode PEPDestroy_TOAR(PEP pep) | |
| 790 | { | ||
| 791 | 974 | PEP_TOAR *ctx = (PEP_TOAR*)pep->data; | |
| 792 | |||
| 793 |
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974 | PetscFunctionBegin; |
| 794 |
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974 | PetscCall(BVDestroy(&ctx->V)); |
| 795 |
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974 | PetscCall(PetscFree(pep->data)); |
| 796 |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARSetRestart_C",NULL)); |
| 797 |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARGetRestart_C",NULL)); |
| 798 |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARSetLocking_C",NULL)); |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARGetLocking_C",NULL)); |
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188 | PetscFunctionReturn(PETSC_SUCCESS); |
| 801 | } | ||
| 802 | |||
| 803 | /*MC | ||
| 804 | PEPTOAR - PEPTOAR = "toar" - The Two-level Orthogonal Arnoldi method (TOAR) | ||
| 805 | for polynomial eigenvalue problems. | ||
| 806 | |||
| 807 | Notes: | ||
| 808 | This is the default solver, and is recommended in most situations. | ||
| 809 | |||
| 810 | It implements the Two-level Orthogonal Arnoldi procedure {cite:p}`Lu16`, | ||
| 811 | which carries out an implicit linearization and operates with an | ||
| 812 | orthogonal Krylov basis stored in a compact form $V = (I \otimes U) S$. | ||
| 813 | The details of the SLEPc implementation can be found in {cite:p}`Cam16a`. | ||
| 814 | |||
| 815 | Level: beginner | ||
| 816 | |||
| 817 | .seealso: [](ch:pep), `PEP`, `PEPType`, `PEPSetType()` | ||
| 818 | M*/ | ||
| 819 | 974 | SLEPC_EXTERN PetscErrorCode PEPCreate_TOAR(PEP pep) | |
| 820 | { | ||
| 821 | 974 | PEP_TOAR *ctx; | |
| 822 | |||
| 823 |
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974 | PetscFunctionBegin; |
| 824 |
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974 | PetscCall(PetscNew(&ctx)); |
| 825 | 974 | pep->data = (void*)ctx; | |
| 826 | |||
| 827 | 974 | pep->lineariz = PETSC_TRUE; | |
| 828 | 974 | ctx->lock = PETSC_TRUE; | |
| 829 | |||
| 830 | 974 | pep->ops->solve = PEPSolve_TOAR; | |
| 831 | 974 | pep->ops->setup = PEPSetUp_TOAR; | |
| 832 | 974 | pep->ops->setfromoptions = PEPSetFromOptions_TOAR; | |
| 833 | 974 | pep->ops->destroy = PEPDestroy_TOAR; | |
| 834 | 974 | pep->ops->view = PEPView_TOAR; | |
| 835 | 974 | pep->ops->backtransform = PEPBackTransform_Default; | |
| 836 | 974 | pep->ops->computevectors = PEPComputeVectors_Default; | |
| 837 | 974 | pep->ops->extractvectors = PEPExtractVectors_TOAR; | |
| 838 | |||
| 839 |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARSetRestart_C",PEPTOARSetRestart_TOAR)); |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARGetRestart_C",PEPTOARGetRestart_TOAR)); |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARSetLocking_C",PEPTOARSetLocking_TOAR)); |
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974 | PetscCall(PetscObjectComposeFunction((PetscObject)pep,"PEPTOARGetLocking_C",PEPTOARGetLocking_TOAR)); |
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188 | PetscFunctionReturn(PETSC_SUCCESS); |
| 844 | } | ||
| 845 |